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An efficient parallelization of phosphorylated peptide and protein identification
peptide protein identification
2010/12/20
Protein sequence database search based on tandem mass spectrometry is an essential method for
protein identification. As the computational demand increases, parallel computing has become an important...
Find: A Novel Web-based Application for Automated Identification of Peptide and Protein by MS/MS Data
Automated Identification Peptide Protein by MS/MS Data
2010/12/14
To identify the unknown peptide sequences from the observed experimental MS/MS spectra, database searching is currently the most popular and reliable approach in high-throughput proteomics studies. We...
Beyond Shared Peak Count: Finding and Using Correlations in MS/MS Data for Peptide Identification
Beyond Shared Peak Count Correlations MS/MS
2010/12/14
Shared Peak Count (SPC), i.e. the number of matched peaks between the experimental MS/MS spectrum and the theoretical one predicted from a peptide sequence in the database, is a widely used scoring me...