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We express the classic ARMA time-series model as a directed graphical model. In doing so, we find that the deterministic re-lationships in the model make it effectively impossible to use the EM algori...
TheMacaulay2packageGraphicalModelscontains algorithms for the algebraic study of graphical models associated to undirected, directed and mixed graphs, and associated collections of conditional indepen...
We consider penalized estimation in hidden Markov models (HMMs) with multi-variate Normal observations. In the moderate-to-large dimensional setting, estimation for HMMs remains challenging in practic...
In this article, we discuss the composite likelihood estimation of sparse Gaussian graph-ical models. When there are symmetry constraints on the concentration matrix or partial correlation matrix, the...
The PC algorithm uses conditional independence tests for model selection in graphical modeling with acyclic directed graphs. In Gaussian mod-els, tests of conditional independence are typically based ...
Causal inference approaches in systems genetics exploit quantitative trait loci (QTL) genotypes to infer causal relationships among phenotypes. The genetic architecture of each phenotype may be comple...
Graphical models are used to describe the conditional independence relations in multivariate data. They have been used for a variety of problems, including log-linear models (Liu and Massam, 2006), ne...
Our concern is selecting the concentration matrix's nonzero coefficients for a sparse Gaussian graphical model in a high-dimensional setting. This corresponds to estimating the graph of conditional de...

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